Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgee_0604 | Lgee_1125 | Lgee_0604 | Lgee_1125 | TnpA transposase. | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.528 |
| Lgee_0604 | Lgee_1147 | Lgee_0604 | Lgee_1147 | TnpA transposase. | General secretion pathway protein. | 0.612 |
| Lgee_0604 | Lgee_1611 | Lgee_0604 | Lgee_1611 | TnpA transposase. | Hypothetical protein. | 0.762 |
| Lgee_0604 | Lgee_1631 | Lgee_0604 | Lgee_1631 | TnpA transposase. | LphB. | 0.698 |
| Lgee_0604 | Lgee_1825 | Lgee_0604 | Lgee_1825 | TnpA transposase. | Hypothetical protein. | 0.760 |
| Lgee_0604 | Lgee_2182 | Lgee_0604 | Lgee_2182 | TnpA transposase. | Hypothetical protein. | 0.647 |
| Lgee_0604 | yjeA | Lgee_0604 | Lgee_1207 | TnpA transposase. | Endo-1,4-beta-xylanase. | 0.746 |
| Lgee_1036 | Lgee_1125 | Lgee_1036 | Lgee_1125 | Flagellar protein. | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.537 |
| Lgee_1036 | mutH | Lgee_1036 | Lgee_0631 | Flagellar protein. | DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.574 |
| Lgee_1125 | Lgee_0604 | Lgee_1125 | Lgee_0604 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | TnpA transposase. | 0.528 |
| Lgee_1125 | Lgee_1036 | Lgee_1125 | Lgee_1036 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Flagellar protein. | 0.537 |
| Lgee_1125 | Lgee_1147 | Lgee_1125 | Lgee_1147 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | General secretion pathway protein. | 0.535 |
| Lgee_1125 | Lgee_1611 | Lgee_1125 | Lgee_1611 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Hypothetical protein. | 0.671 |
| Lgee_1125 | Lgee_1631 | Lgee_1125 | Lgee_1631 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | LphB. | 0.517 |
| Lgee_1125 | Lgee_1825 | Lgee_1125 | Lgee_1825 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Hypothetical protein. | 0.565 |
| Lgee_1125 | Lgee_2182 | Lgee_1125 | Lgee_2182 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Hypothetical protein. | 0.553 |
| Lgee_1125 | mutH | Lgee_1125 | Lgee_0631 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.622 |
| Lgee_1125 | tolA | Lgee_1125 | Lgee_2107 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | TolA colicin import membrane protein. | 0.643 |
| Lgee_1125 | yjeA | Lgee_1125 | Lgee_1207 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Endo-1,4-beta-xylanase. | 0.583 |
| Lgee_1147 | Lgee_0604 | Lgee_1147 | Lgee_0604 | General secretion pathway protein. | TnpA transposase. | 0.612 |
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