rnc protein (Legionella geestiana) - STRING interaction network

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rnc

Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (227 aa)

Predicted Functional Partners:

Lgee_2122

0.925

prfB

0.924

rplS

0.903

Lgee_1766

0.903

rplQ

0.894

rpmA

0.892

rpmF

0.892

rpsK

0.885

rplO

0.883

rpsI

0.883

Your Current Organism:

Legionella geestiana

NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lgee_1766	rnc	Lgee_1766	Lgee_1140	TrpH protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.903
Lgee_2122	prfB	Lgee_2122	Lgee_1365	Acetyltransferase.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.732
Lgee_2122	rnc	Lgee_2122	Lgee_1140	Acetyltransferase.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.925
Lgee_2122	rplO	Lgee_2122	Lgee_1318	Acetyltransferase.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.942
Lgee_2122	rplQ	Lgee_2122	Lgee_1312	Acetyltransferase.	50S ribosomal protein L17.	0.962
Lgee_2122	rplS	Lgee_2122	Lgee_1443	Acetyltransferase.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.926
Lgee_2122	rpmA	Lgee_2122	Lgee_1455	Acetyltransferase.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.727
Lgee_2122	rpmF	Lgee_2122	Lgee_1798	Acetyltransferase.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.837
prfB	Lgee_2122	Lgee_1365	Lgee_2122	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	Acetyltransferase.	0.732
prfB	rnc	Lgee_1365	Lgee_1140	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.924
prfB	rplO	Lgee_1365	Lgee_1318	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.922
prfB	rplQ	Lgee_1365	Lgee_1312	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L17.	0.941
prfB	rplS	Lgee_1365	Lgee_1443	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.933
prfB	rpmA	Lgee_1365	Lgee_1455	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.968
prfB	rpmF	Lgee_1365	Lgee_1798	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.936
prfB	rpsI	Lgee_1365	Lgee_2193	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.893
prfB	rpsK	Lgee_1365	Lgee_1315	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.941
rnc	Lgee_1766	Lgee_1140	Lgee_1766	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	TrpH protein.	0.903
rnc	Lgee_2122	Lgee_1140	Lgee_2122	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Acetyltransferase.	0.925
rnc	prfB	Lgee_1140	Lgee_1365	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.924

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