STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_1233Leucine Rich repeats (2 copies). (315 aa)    
Predicted Functional Partners:
Lgee_1234
Leucine Rich repeats (2 copies).
 
    
0.718
legL1
Gala protein type 1, 3 or 4.
  
     0.680
Lgee_1142
Adenosine deaminase.
  
     0.649
legL7_2
Leucine-rich repeat-containing protein.
  
     0.625
Lgee_0719
Leucine-rich repeat protein.
  
     0.590
Lgee_0720
Leucine-rich repeat protein.
  
     0.528
Lgee_1981
Protein phosphatase 2C.
  
     0.523
Lgee_2235
U-box domain protein.
  
     0.504
Lgee_1823
O-methyltransferase.
  
     0.487
Lgee_1972
Hypothetical protein.
  
     0.472
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.