Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lgee_1502Methyltransferase domain protein. (293 aa)    
Predicted Functional Partners:
Lgee_0819
Putative Transposase (IS4 family).
  
     0.561
Lgee_1522
Putative Transposase (IS4 family).
  
     0.552
helA
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.541
helB
HelB protein.
       0.541
helC
HelC protein.
       0.541
dotG
IcmE/DotG protein.
  
    0.508
Lgee_1503
Hypothetical protein.
       0.501
Lgee_1732
Peptide synthetase, non-ribosomal.
     
 0.470
Lgee_0818
Putative Transposase (IS4 family).
  
     0.448
Lgee_1498
Hypothetical protein.
       0.428
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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