Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_1669FAD dependent oxidoreductase. (313 aa)    
Predicted Functional Partners:
Lgee_1591
Oxidoreductase.
  
   
 0.734
Lgee_1732
Peptide synthetase, non-ribosomal.
  
 
 0.550
oxdD
Oxalate decarboxylase OxdD.
 
     0.544
Lgee_1823
O-methyltransferase.
  
     0.520
Lgee_0010
O-methyltransferase.
  
     0.515
hmgA
Homogentisate 1,2-dioxygenase.
 
  
 0.486
mvaA
Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family.
   
  
 0.481
Lgee_1543
Putative Sterol desaturase.
   
 
 0.454
Lgee_0157
Methyltransferase.
   
  0.439
Lgee_0382
Methyltransferase, ubiE/COQ5 family.
   
  0.439
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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