Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_16793-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (244 aa)    
Predicted Functional Partners:
Lgee_1680
YcaC related amidohydrolase.
   
   0.869
Lgee_2122
Acetyltransferase.
  
 
 0.850
Lgee_1732
Peptide synthetase, non-ribosomal.
  
 
 0.804
Lgee_1681
SAM-dependent methyltransferase.
       0.787
Lgee_2099
DegP protease.
   
  0.608
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
  
 0.523
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.523
rdgC
Recombination associated protein; May be involved in recombination. Belongs to the RdgC family.
       0.520
fabD_2
Malonyl CoA-ACP transacylase.
 
 
 0.489
Lgee_0824
Ferredoxin reductase.
  
 
 0.483
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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