Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_1702Oxidoreductase. (240 aa)    
Predicted Functional Partners:
Lgee_1703
L-gululonolactone oxidase.
 
  
 0.967
Lgee_1632
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
    0.769
Lgee_1732
Peptide synthetase, non-ribosomal.
  
  
 0.706
Lgee_2122
Acetyltransferase.
  
 
 0.705
Lgee_1520
2-acylglycerophosphoethanolamine acyltransferase.
   
 
 0.603
Lgee_1704
Hypothetical protein.
       0.592
Lgee_1345
Nucleotidyltransferase.
  
 
   0.518
Lgee_1020
Flagellar biosynthetic protein FlhB.
       0.504
fliR_1
Flagellar biosynthetic protein fliR.
       0.504
fliQ_1
Flagellar biosynthetic protein FliQ.
       0.504
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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