Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lgee_1746Metal dependent phosphohydrolase. (728 aa)    
Predicted Functional Partners:
Lgee_0709
Regulatory protein (GGDEF and EAL domains).
 
 
 0.988
Lgee_2001
Two component response regulator with GGDEF domain protein.
 
 0.969
Lgee_0024
Sensory box histidine kinase/response regulator.
 
 
 0.965
Lgee_1920
Inner membrane protein/sensory box protein LssE.
 
 
 
 0.964
Lgee_1531
Two component histidine kinase.
 
 
 0.963
Lgee_1507
Sensory box histidine kinase/response regulator.
 
 
 0.962
Lgee_1133
Inner membrane protein.
 
 
 
 0.950
Lgee_1827
GGDEF/EAL domain-containing sensory box protein.
 
 
 
 0.949
Lgee_0831
Sensory box histidine kinase/response regulator.
 
 
 0.939
Lgee_1733
Sensory box histidine kinase/response regulator.
 
 
 0.939
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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