Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lgee_1784Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (471 aa)    
Predicted Functional Partners:
Lgee_1785
Deoxyribodipyrimidine photolyase.
 
     0.872
Lgee_0410
Deoxyribodipyrimidine photolyase-related protein.
 
   
 0.665
Lgee_2122
Acetyltransferase.
  
   0.555
Lgee_1786
Hypothetical protein.
 
     0.550
Lgee_0409
Tryptophan-rich sensory protein.
 
  
 0.538
Lgee_1783
Major facilitator family transporter.
       0.422
Lgee_1782
Putative thermolabile hemolysin.
       0.409
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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