Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_1818Dienelactone hydrolase. (268 aa)    
Predicted Functional Partners:
Lgee_1819
Cytochrome D1 heme domain protein.
 
     0.837
Lgee_1817
Hypothetical protein.
       0.741
Lgee_1820
MarR family transporter transcriptional regulator.
 
     0.591
Lgee_0168
Putative secreted esterase.
  
     0.517
trbJ_1
Conjugal transfer protein TrbJ.
  
     0.450
cysC
Putative adenylyl-sulfate kinase.
  
    0.408
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
  
 
   0.400
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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