Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgee_1142 | Lgee_1233 | Lgee_1142 | Lgee_1233 | Adenosine deaminase. | Leucine Rich repeats (2 copies). | 0.649 |
Lgee_1142 | Lgee_1823 | Lgee_1142 | Lgee_1823 | Adenosine deaminase. | O-methyltransferase. | 0.471 |
Lgee_1142 | legL1 | Lgee_1142 | Lgee_0006 | Adenosine deaminase. | Gala protein type 1, 3 or 4. | 0.453 |
Lgee_1233 | Lgee_1142 | Lgee_1233 | Lgee_1142 | Leucine Rich repeats (2 copies). | Adenosine deaminase. | 0.649 |
Lgee_1233 | Lgee_1823 | Lgee_1233 | Lgee_1823 | Leucine Rich repeats (2 copies). | O-methyltransferase. | 0.487 |
Lgee_1233 | legL1 | Lgee_1233 | Lgee_0006 | Leucine Rich repeats (2 copies). | Gala protein type 1, 3 or 4. | 0.680 |
Lgee_1591 | Lgee_1669 | Lgee_1591 | Lgee_1669 | Oxidoreductase. | FAD dependent oxidoreductase. | 0.736 |
Lgee_1591 | Lgee_1732 | Lgee_1591 | Lgee_1732 | Oxidoreductase. | Peptide synthetase, non-ribosomal. | 0.583 |
Lgee_1591 | Lgee_1823 | Lgee_1591 | Lgee_1823 | Oxidoreductase. | O-methyltransferase. | 0.630 |
Lgee_1591 | Lgee_2122 | Lgee_1591 | Lgee_2122 | Oxidoreductase. | Acetyltransferase. | 0.401 |
Lgee_1669 | Lgee_1591 | Lgee_1669 | Lgee_1591 | FAD dependent oxidoreductase. | Oxidoreductase. | 0.736 |
Lgee_1669 | Lgee_1732 | Lgee_1669 | Lgee_1732 | FAD dependent oxidoreductase. | Peptide synthetase, non-ribosomal. | 0.691 |
Lgee_1669 | Lgee_1823 | Lgee_1669 | Lgee_1823 | FAD dependent oxidoreductase. | O-methyltransferase. | 0.520 |
Lgee_1732 | Lgee_1591 | Lgee_1732 | Lgee_1591 | Peptide synthetase, non-ribosomal. | Oxidoreductase. | 0.583 |
Lgee_1732 | Lgee_1669 | Lgee_1732 | Lgee_1669 | Peptide synthetase, non-ribosomal. | FAD dependent oxidoreductase. | 0.691 |
Lgee_1732 | Lgee_1823 | Lgee_1732 | Lgee_1823 | Peptide synthetase, non-ribosomal. | O-methyltransferase. | 0.595 |
Lgee_1732 | Lgee_2122 | Lgee_1732 | Lgee_2122 | Peptide synthetase, non-ribosomal. | Acetyltransferase. | 0.999 |
Lgee_1732 | crtI | Lgee_1732 | Lgee_1811 | Peptide synthetase, non-ribosomal. | Phytoene desaturase (lycopene-forming). | 0.500 |
Lgee_1821 | Lgee_1822 | Lgee_1821 | Lgee_1822 | Sel-1 protein. | General secretion pathway protein C. | 0.805 |
Lgee_1821 | Lgee_1823 | Lgee_1821 | Lgee_1823 | Sel-1 protein. | O-methyltransferase. | 0.593 |
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