Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lgee_1968TPR repeat containing protein. (242 aa)    
Predicted Functional Partners:
Lgee_1967
Hypothetical protein.
     0.994
Lgee_1969
KQDN repeat-containing protein.
 
 
 0.970
Lgee_1964
Hypothetical protein.
 
  
 0.966
Lgee_1966
Hypothetical protein.
 
   
 0.955
Lgee_1965
Hypothetical protein.
 
     0.951
Lgee_1963
ATPase MoxR.
 
     0.928
htpG
Class III heat-shock protein HtpG(molecular chaperone); Molecular chaperone. Has ATPase activity.
   
 0.797
yjeA
Endo-1,4-beta-xylanase.
    
 0.791
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.784
bcp
Acetylpolyamine aminohydrolase.
    
  0.772
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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