Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgee_0663 | Lgee_1404 | Lgee_0663 | Lgee_1404 | Cytochrome c5. | SCO1/SenC family transporter protein. | 0.487 |
| Lgee_0663 | coxB | Lgee_0663 | Lgee_0542 | Cytochrome c5. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.533 |
| Lgee_0663 | cyc4 | Lgee_0663 | Lgee_1985 | Cytochrome c5. | Cytochrome c4. | 0.795 |
| Lgee_0663 | petA | Lgee_0663 | Lgee_2196 | Cytochrome c5. | Ubiquinol--cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.638 |
| Lgee_0663 | petC | Lgee_0663 | Lgee_2198 | Cytochrome c5. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.745 |
| Lgee_1404 | Lgee_0663 | Lgee_1404 | Lgee_0663 | SCO1/SenC family transporter protein. | Cytochrome c5. | 0.487 |
| Lgee_1404 | coxB | Lgee_1404 | Lgee_0542 | SCO1/SenC family transporter protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.907 |
| Lgee_1404 | cyc | Lgee_1404 | Lgee_1677 | SCO1/SenC family transporter protein. | Cytochrome c5. | 0.461 |
| Lgee_1404 | cyc4 | Lgee_1404 | Lgee_1985 | SCO1/SenC family transporter protein. | Cytochrome c4. | 0.716 |
| Lgee_1404 | petA | Lgee_1404 | Lgee_2196 | SCO1/SenC family transporter protein. | Ubiquinol--cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.535 |
| Lgee_1404 | petC | Lgee_1404 | Lgee_2198 | SCO1/SenC family transporter protein. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.666 |
| Lgee_1986 | cyc4 | Lgee_1986 | Lgee_1985 | Hypothetical protein. | Cytochrome c4. | 0.535 |
| Lgee_1986 | dsbA | Lgee_1986 | Lgee_1984 | Hypothetical protein. | Thiol:disulfide interchange protein precursor DsbA. | 0.535 |
| coxB | Lgee_0663 | Lgee_0542 | Lgee_0663 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c5. | 0.533 |
| coxB | Lgee_1404 | Lgee_0542 | Lgee_1404 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | SCO1/SenC family transporter protein. | 0.907 |
| coxB | cyc | Lgee_0542 | Lgee_1677 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c5. | 0.466 |
| coxB | cyc4 | Lgee_0542 | Lgee_1985 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c4. | 0.656 |
| coxB | cycA | Lgee_0542 | Lgee_0541 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c. | 0.934 |
| coxB | petA | Lgee_0542 | Lgee_2196 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Ubiquinol--cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| coxB | petB | Lgee_0542 | Lgee_2197 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
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