STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_2001Two component response regulator with GGDEF domain protein. (394 aa)    
Predicted Functional Partners:
gacS/letS
Transmission sensor LetS.
 
 0.991
Lgee_1507
Sensory box histidine kinase/response regulator.
 
 0.990
Lgee_0831
Sensory box histidine kinase/response regulator.
 
 0.989
Lgee_0024
Sensory box histidine kinase/response regulator.
 
 
 0.988
Lgee_1733
Sensory box histidine kinase/response regulator.
 
 0.988
Lgee_0287
Hypothetical protein.
  
 
 0.986
Lgee_0709
Regulatory protein (GGDEF and EAL domains).
 
 0.976
Lgee_0418
Sensory box sensor histidine kinase/response regulator.
  
 
 0.973
Lgee_1531
Two component histidine kinase.
 
 
 0.933
Lgee_1746
Metal dependent phosphohydrolase.
 
 0.930
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.