Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_2002Ankyrin repeats (3 copies). (916 aa)    
Predicted Functional Partners:
Lgee_0291
Thaumatin domain-containing protein.
  
 
   0.846
rhsA
Putative deoxyribonuclease RhsA.
 
    0.770
Lgee_0533
Leucine Rich repeats (2 copies).
  
     0.753
yflS
Putative malate transporter YflS.
  
 
   0.752
Lgee_0768
Hypothetical protein.
  
     0.749
Lgee_1526
Leucine Rich repeats (2 copies).
  
     0.722
Lgee_1653
Hypothetical protein.
  
     0.708
Lgee_2130
AAA domain (dynein-related subfamily).
  
     0.707
Lgee_1816
AAA domain (dynein-related subfamily).
  
     0.682
Lgee_0594
AAA domain (dynein-related subfamily).
  
     0.677
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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