STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_2002Ankyrin repeats (3 copies). (916 aa)    
Predicted Functional Partners:
Lgee_0291
Thaumatin domain-containing protein.
  
 
 
 0.891
rhsA
Putative deoxyribonuclease RhsA.
 
  
 0.785
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.762
yflS
Putative malate transporter YflS.
  
 
   0.761
Lgee_0533
Leucine Rich repeats (2 copies).
  
     0.753
Lgee_0768
Hypothetical protein.
  
     0.749
Lgee_1526
Leucine Rich repeats (2 copies).
  
     0.722
Lgee_1653
Hypothetical protein.
  
     0.708
Lgee_2130
AAA domain (dynein-related subfamily).
  
     0.707
Lgee_2122
Acetyltransferase.
   
 0.702
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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