Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_2057Hypothetical protein; C-terminal part of DNA polymerase, bacteriophage-type. (221 aa)    
Predicted Functional Partners:
Lgee_2056
Tfp type 4 fimbrial pilin like signal peptide protein domain protein.
       0.863
rssA
Esterase of the alpha-beta hydrolase superfamily protein.
     
 0.816
ubiA
4-hydroxybenzoate-octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
       0.810
ubiC
4-hydroxybenzoate synthetase.
       0.810
TsaB
Glycoprotease.
  
    0.737
Lgee_2055
Hypothetical protein.
       0.718
Lgee_0420
Peptidase, M23 family.
   
   0.654
ssb-2
Single strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
 
 0.576
pilB
Pilus assembly protein PilB.
       0.564
pilC
Pilus assembly protein PilC.
       0.564
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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