Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_2084Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. (371 aa)    
Predicted Functional Partners:
Lgee_1630
Putative nucleoside-diphosphate sugar epimerase.
 
  
 0.885
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.863
lapB
Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.
       0.836
Lgee_2086
Hypothetical protein.
       0.836
Lgee_1732
Peptide synthetase, non-ribosomal.
  
 
 0.769
Lgee_0977
Oxidoreductase.
 
  
 0.732
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
 
  
 0.688
capL
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.635
Lgee_0935
Glycosyl transferase, group 2 family protein.
  
  
 0.600
kanE
Alpha-D-kanosaminyltransferase.
 
  
 0.596
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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