STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_2116Putative ErfK/YbiS/YcfS/YnhG protein. (166 aa)    
Predicted Functional Partners:
yneI
Aldehyde dehydrogenase.
       0.805
lidK
(CDP-alcohol) phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.608
Lgee_2115
NAD-glutamate dehydrogenase.
       0.546
cybB
Cytochrome b-561 transmembrane protein.
       0.506
enhB_2
Enhanced entry protein EnhB.
       0.493
Lgee_2120
Putative thiol-disulfide isomerase.
       0.463
Lgee_0050
Extracellular solute-binding protein.
 
     0.440
Lgee_0049
ABC transporter permease.
 
     0.432
Lgee_0048
Peptide ABC transporter permease.
 
     0.404
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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