STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yfcYbeta-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (436 aa)    
Predicted Functional Partners:
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
 
 0.999
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 0.999
Lgee_1347
acyl-CoA dehydrogenase.
 
 0.984
fadE
acyl-CoA dehydrogenase.
 
 0.983
Lgee_0264
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.942
mvaB
hydroxymethylglutaryl-CoA lyase.
  
 
 0.941
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.935
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.935
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.934
phbB
Acetyoacetyl CoA reductase.
  
 0.932
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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