STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_2154ATPase. (419 aa)    
Predicted Functional Partners:
Lgee_0862
Fic/DOC family protein.
 
     0.603
Lgee_0833
Filamentation induced by cAMP protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.
 
     0.538
pepN
Aminopeptidase.
       0.491
Lgee_1119
Protein of unknown function DUF1016.
  
     0.484
Lgee_0143
ATP-dependent DNA helicase.
 
     0.444
Lgee_1874
Protein of unknown function DUF1016.
  
     0.431
osmY
Osmotically inducible protein Y- like protein.
       0.423
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.