Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
osmYOsmotically inducible protein Y- like protein. (105 aa)    
Predicted Functional Partners:
Lgee_1611
Hypothetical protein.
 
     0.786
pepN
Aminopeptidase.
       0.652
Lgee_0200
Hypothetical protein.
  
    0.591
rhsA
Putative deoxyribonuclease RhsA.
 
  
 0.576
Lgee_1994
ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
    0.564
cbpA
DNA-binding protein DnaJ.
       0.504
Lgee_0458
Putative chaperone-modulator protein CbpM.
  
    0.504
hrp1
Hypoxic response protein 1.
       0.504
Lgee_2015
Type II/III secretion system protein.
  
     0.494
Lgee_1825
Hypothetical protein.
  
     0.466
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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