Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lgee_2179Tyrosine-specific transport protein. (391 aa)    
Predicted Functional Partners:
Lgee_2180
Outer membrane protein, OmpA family protein.
       0.701
Lgee_2178
Tyrosine-specific transport protein.
 
    
0.645
Lgee_1011
Protein IcmO (DotL).
  
     0.581
Lgee_1259
IcmT protein.
  
     0.570
enhA_2
Enhanced entry protein EnhA.
  
     0.560
Lgee_2247
Amino acid antiporter.
  
 
   0.555
Lgee_0460
HTH-type transcriptional regulator.
  
     0.538
Lgee_0302
Amino acid antiporter.
  
 
   0.508
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.507
kup
KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
       0.504
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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