STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbbAPutative fused transporter subunits of ABC superfamily: ATP-binding component. (923 aa)    
Predicted Functional Partners:
yhhJ
ABC transporter permease.
 
 
 
0.915
yhiI
HlyD family secretion protein.
 
     0.881
Lgra_0160
HlyD family secretion protein.
 
  
 0.839
macA_1
Hemolysin D.
 
  
 0.730
ybhS
ABC transporter permease.
 
 
0.632
wzm
ABC transporter of LPS O-antigen, Wzm.
    
 0.629
Lgra_2503
Hypothetical protein.
  
 
  0.602
Lgra_2504
Hypothetical protein.
  
 
  0.602
yadH
Transporter subunit: membrane component of ABC superfamily protein.
  
 
 0.584
Lgra_2195
acyl-CoA synthetase.
  
  
 0.582
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.