STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_0082GNAT family acetyltransferase. (155 aa)    
Predicted Functional Partners:
Lgra_0083
Methyltransferase.
 
     0.841
Lgra_0089
Putative aminoglycoside phosphotransferase.
 
     0.803
Lgra_0081
Hypothetical protein.
 
     0.788
Lgra_0088
N-acetyltransferase GCN5.
 
  
  0.765
Lgra_0084
Muramoyltetrapeptide carboxypeptidase.
       0.746
Lgra_0086
N-acetyltransferase GCN5.
 
  
  0.723
Lgra_0087
Aminoalkylphosphonic acid N-acetyltransferase.
 
  
  0.667
Lgra_0085
Hypothetical protein.
       0.617
hisIE
Histidine biosynthesis bifunctional protein HisIE; In the N-terminal section; belongs to the PRA-CH family.
    
  0.571
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.547
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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