Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgra_0089 | pksM | Lgra_0089 | Lgra_1928 | Putative aminoglycoside phosphotransferase. | Polyketide synthase. | 0.406 |
Lgra_0089 | yueD_1 | Lgra_0089 | Lgra_0090 | Putative aminoglycoside phosphotransferase. | Sepiapterin reductase. | 0.678 |
Lgra_0544 | Lgra_1551 | Lgra_0544 | Lgra_1551 | Polyketide synthase. | Saframycin Mx1 synthetase B. | 0.999 |
Lgra_0544 | Lgra_2195 | Lgra_0544 | Lgra_2195 | Polyketide synthase. | acyl-CoA synthetase. | 0.999 |
Lgra_0544 | hmp | Lgra_0544 | Lgra_3086 | Polyketide synthase. | Oxidoreductase, FAD-binding protein. | 0.611 |
Lgra_0544 | lgrB_2 | Lgra_0544 | Lgra_1497 | Polyketide synthase. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.998 |
Lgra_0544 | pksM | Lgra_0544 | Lgra_1928 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Lgra_0544 | pta | Lgra_0544 | Lgra_2415 | Polyketide synthase. | Phosphate acetyl/butaryl transferase. | 0.781 |
Lgra_0544 | tycC_1 | Lgra_0544 | Lgra_0545 | Polyketide synthase. | Non-ribosomal peptide synthase. | 0.999 |
Lgra_0544 | xylA | Lgra_0544 | Lgra_0523 | Polyketide synthase. | Xylene monooxygenase. | 0.632 |
Lgra_0544 | yueD_1 | Lgra_0544 | Lgra_0090 | Polyketide synthase. | Sepiapterin reductase. | 0.780 |
Lgra_1551 | Lgra_0544 | Lgra_1551 | Lgra_0544 | Saframycin Mx1 synthetase B. | Polyketide synthase. | 0.999 |
Lgra_1551 | Lgra_2195 | Lgra_1551 | Lgra_2195 | Saframycin Mx1 synthetase B. | acyl-CoA synthetase. | 0.999 |
Lgra_1551 | hmp | Lgra_1551 | Lgra_3086 | Saframycin Mx1 synthetase B. | Oxidoreductase, FAD-binding protein. | 0.648 |
Lgra_1551 | lgrB_2 | Lgra_1551 | Lgra_1497 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lgra_1551 | pksM | Lgra_1551 | Lgra_1928 | Saframycin Mx1 synthetase B. | Polyketide synthase. | 0.987 |
Lgra_1551 | pta | Lgra_1551 | Lgra_2415 | Saframycin Mx1 synthetase B. | Phosphate acetyl/butaryl transferase. | 0.788 |
Lgra_1551 | tycC_1 | Lgra_1551 | Lgra_0545 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthase. | 0.999 |
Lgra_1551 | xylA | Lgra_1551 | Lgra_0523 | Saframycin Mx1 synthetase B. | Xylene monooxygenase. | 0.654 |
Lgra_1551 | yueD_1 | Lgra_1551 | Lgra_0090 | Saframycin Mx1 synthetase B. | Sepiapterin reductase. | 0.781 |
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