Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgra_0130 | Lgra_0132 | Lgra_0130 | Lgra_0132 | ATPase. | GNAT family acetyltransferase. | 0.908 |
Lgra_0130 | Lgra_0134 | Lgra_0130 | Lgra_0134 | ATPase. | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.927 |
Lgra_0130 | Lgra_0135 | Lgra_0130 | Lgra_0135 | ATPase. | Multidrug resistance ABC transporter ATP binding protein. | 0.836 |
Lgra_0130 | grpB_1 | Lgra_0130 | Lgra_0133 | ATPase. | Glutamate rich protein GrpB. | 0.813 |
Lgra_0130 | uup_1 | Lgra_0130 | Lgra_0136 | ATPase. | ABC transporter ATP-binding protein Uup. | 0.831 |
Lgra_0132 | Lgra_0130 | Lgra_0132 | Lgra_0130 | GNAT family acetyltransferase. | ATPase. | 0.908 |
Lgra_0132 | Lgra_0134 | Lgra_0132 | Lgra_0134 | GNAT family acetyltransferase. | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.938 |
Lgra_0132 | Lgra_0135 | Lgra_0132 | Lgra_0135 | GNAT family acetyltransferase. | Multidrug resistance ABC transporter ATP binding protein. | 0.862 |
Lgra_0132 | grpB_1 | Lgra_0132 | Lgra_0133 | GNAT family acetyltransferase. | Glutamate rich protein GrpB. | 0.892 |
Lgra_0132 | uup_1 | Lgra_0132 | Lgra_0136 | GNAT family acetyltransferase. | ABC transporter ATP-binding protein Uup. | 0.869 |
Lgra_0134 | Lgra_0130 | Lgra_0134 | Lgra_0130 | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | ATPase. | 0.927 |
Lgra_0134 | Lgra_0132 | Lgra_0134 | Lgra_0132 | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | GNAT family acetyltransferase. | 0.938 |
Lgra_0134 | Lgra_0135 | Lgra_0134 | Lgra_0135 | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | Multidrug resistance ABC transporter ATP binding protein. | 0.837 |
Lgra_0134 | grpB_1 | Lgra_0134 | Lgra_0133 | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | Glutamate rich protein GrpB. | 0.811 |
Lgra_0134 | uup_1 | Lgra_0134 | Lgra_0136 | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | ABC transporter ATP-binding protein Uup. | 0.832 |
Lgra_0135 | Lgra_0130 | Lgra_0135 | Lgra_0130 | Multidrug resistance ABC transporter ATP binding protein. | ATPase. | 0.836 |
Lgra_0135 | Lgra_0132 | Lgra_0135 | Lgra_0132 | Multidrug resistance ABC transporter ATP binding protein. | GNAT family acetyltransferase. | 0.862 |
Lgra_0135 | Lgra_0134 | Lgra_0135 | Lgra_0134 | Multidrug resistance ABC transporter ATP binding protein. | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.837 |
Lgra_0135 | grpB_1 | Lgra_0135 | Lgra_0133 | Multidrug resistance ABC transporter ATP binding protein. | Glutamate rich protein GrpB. | 0.779 |
Lgra_0135 | uup_1 | Lgra_0135 | Lgra_0136 | Multidrug resistance ABC transporter ATP binding protein. | ABC transporter ATP-binding protein Uup. | 0.918 |
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