STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pleDSensor histidine kinase. (158 aa)    
Predicted Functional Partners:
cph2_2
Putative signal transduction protein.
 
 0.889
ycgG
Regulatory protein (EAL domain).
  
 
 0.816
cph2_4
Regulatory protein (GGDEF and EAL domains).
  
   0.797
arcB_3
Sensory histidine-kinase / response regulator.
 
 0.786
luxQ
Sensor histidine kinase.
  
 0.784
csrD
Two component histidine kinase.
  
 
  0.765
letS
Legionella transmission sensor LetS.
 
 0.764
bvgS
Sensory box histidine kinase/response regulator.
  
 0.758
gmr_2
Sensory box/GGDEF domain protein.
 
0.749
gmr_4
Hypothetical protein.
 
0.748
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.