STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
emrA_1Multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (307 aa)    
Predicted Functional Partners:
emrB
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 
 0.982
slyA
MarR family transporter transcriptional regulator.
 
     0.819
emrB_1
Multidrug resistance protein, MFS superfamily.
 
   0.807
hsrA_1
Multidrug efflux protein; Belongs to the major facilitator superfamily.
 
 
 0.806
hsrA_2
Transporter of the major facilitator superfamily (MFS).
 
 
 0.806
oprM_8
Outer membrane efflux protein.
 
 
 0.794
tolC
Outer membrane protein TolC.
 
 
 0.750
mdtP
Outer membrane efflux lipoprotein.
 
 
 0.644
oprM_6
Outer membrane efflux protein.
 
 
 0.643
oprM_2
Outer membrane efflux protein.
 
 
 0.631
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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