STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_0160HlyD family secretion protein. (180 aa)    
Predicted Functional Partners:
yhiI
HlyD family secretion protein.
 
     0.961
yhhJ
ABC transporter permease.
 
  
 0.842
rbbA
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
 
  
 0.815
ybhS
ABC transporter permease.
 
  
 0.756
macA_1
Hemolysin D.
  
     0.705
ybhF
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
 
  
 0.534
ycdT
Diguanylate kinase.
       0.533
apxIB_1
Toxin secretion ATP binding protein.
   
  0.475
apxIB_2
ABC transporter.
   
  0.475
SunT_1
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
   
  0.475
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.