STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_0251AIG2-like family protein. (127 aa)    
Predicted Functional Partners:
Lgra_0250
Hypothetical protein.
 
     0.814
Lgra_0252
Tn3 transposase DDE domain protein.
       0.524
xerC_3
Hypothetical protein.
       0.524
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
  0.513
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     
  0.500
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.442
Lgra_1331
Succinylglutamate desuccinylase / aspartoacylase family protein.
    
 0.434
thiO_2
FAD dependent oxidoreductase.
 
  
  0.411
etfB
Electron transfer flavoprotein beta-subunit (Beta-ETF).
    
  0.409
etfA
Electron transfer flavoprotein, alpha subunit.
    
  0.409
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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