STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yfcXEnoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (672 aa)    
Predicted Functional Partners:
yfcY
beta-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
atoB
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.998
fadE_1
Acyl coenzyme A dehydrogenase.
 
 0.993
fadE_2
Acyl coenzyme A dehydrogenase.
 
 0.993
gcdH
glutaryl-CoA dehydrogenase.
 
 0.983
Lgra_1674
acyl-CoA dehydrogenase.
  
 0.981
pta
Phosphate acetyl/butaryl transferase.
  
 0.973
caiA
Acyl CoA dehydrogenase.
 
 0.952
Lgra_2198
acyl-CoA dehydrogenase.
 
 0.947
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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