Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgra_0266 | enhB_1 | Lgra_0266 | Lgra_0267 | Hypothetical protein. | Enhanced entry protein EnhB. | 0.795 |
Lgra_0266 | lidK | Lgra_0266 | Lgra_0268 | Hypothetical protein. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.602 |
Lgra_0266 | yneI | Lgra_0266 | Lgra_0269 | Hypothetical protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.418 |
enhB_1 | Lgra_0266 | Lgra_0267 | Lgra_0266 | Enhanced entry protein EnhB. | Hypothetical protein. | 0.795 |
enhB_1 | lidK | Lgra_0267 | Lgra_0268 | Enhanced entry protein EnhB. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.602 |
enhB_1 | yneI | Lgra_0267 | Lgra_0269 | Enhanced entry protein EnhB. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.423 |
lidK | Lgra_0266 | Lgra_0268 | Lgra_0266 | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Hypothetical protein. | 0.602 |
lidK | enhB_1 | Lgra_0268 | Lgra_0267 | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Enhanced entry protein EnhB. | 0.602 |
lidK | yneI | Lgra_0268 | Lgra_0269 | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.539 |
yneI | Lgra_0266 | Lgra_0269 | Lgra_0266 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.418 |
yneI | enhB_1 | Lgra_0269 | Lgra_0267 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Enhanced entry protein EnhB. | 0.423 |
yneI | lidK | Lgra_0269 | Lgra_0268 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.539 |