Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lgra_0331Phospholipase, patatin family. (386 aa)    
Predicted Functional Partners:
phbC_2
PHA synthase.
  
     0.717
phbC_1
PHA synthase.
  
     0.716
phbC_3
Polyhydroxyalkanoic synthase.
  
     0.715
phbC_1-2
Poly-beta-hydroxybutyrate synthase.
  
     0.671
adc_1
Acetoacetate decarboxylase.
 
     0.606
Lgra_2359
Poly(3-hydroxybutyrate) depolymerase.
  
     0.580
PhaR
PHB/PHA accumulation regulator DNA-binding domain protein.
 
     0.540
Lgra_2195
acyl-CoA synthetase.
    
  0.487
Lgra_2318
Hypothetical protein.
  
     0.436
aas
2- acylglycerophosphoethanolamineacyltransferase/acyl-(acyl- carrier-protein) synthetase.
    
  0.409
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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