STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_0352Signal peptide protein. (88 aa)    
Predicted Functional Partners:
Lgra_1900
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.973
Lgra_1899
Hypothetical protein.
 
  
 0.940
yceJ
Cytochrome b561.
 
     0.775
yceI
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
       0.743
trbI
Conjugal transfer protein trbI.
   
    0.604
trbG
Conjugal transfer protein trbG precursor.
   
    0.604
msrA_2
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
    0.583
rtxA-2
Structural toxin protein RtxA.
   
    0.522
Lgra_1951
TQO small subunit DoxD.
 
  
 0.504
yceI_2
Putative YceI-like family protein; Belongs to the UPF0312 family.
       0.443
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.