Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_0512Periplasmic protein. (198 aa)    
Predicted Functional Partners:
csrD
Two component histidine kinase.
 
 
 0.980
bepC
Agglutination protein.
 
   
 0.942
lssD_1
Secretion system protein D.
 
   
 0.879
apxIB_1
Toxin secretion ATP binding protein.
 
   
 0.870
Lgra_0956
Hypothetical protein.
 
     0.757
rtxA2
Structural toxin protein RtxA.
  
   
 0.683
spo0F
Hypothetical protein.
   
 
 0.463
gmr_4
Hypothetical protein.
   
 
 0.463
gmr_3
GGDEF domain-containing sensory box protein.
   
 
 0.463
xseA
Exonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.443
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.