Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
yveA_2Amino acid transport protein. (521 aa)    
Predicted Functional Partners:
tehB
Tellurite resistance protein TehB.
       0.773
lysP
Amino acid (lysine) permease.
  
  
  0.727
steT
Amino acid transporter.
  
     0.607
nixA
High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.586
Lgra_0528
Hypothetical protein.
       0.492
Lgra_3269
Alpha-amylase.
    
  0.465
amyA
Alpha-amylase.
    
  0.465
nadE
Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.454
gadC_2
Amino acid antiporter.
  
     0.425
iraB
Hypothetical protein.
  
 
   0.408
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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