STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lvgAVirulence protein LvgA. (208 aa)    
Predicted Functional Partners:
icmW
Intracellular multiplication protein IcmW.
    
 
 0.975
icmS
Protein IcmS.
    
 
 0.966
Lgra_2824
Putative esterase with patatin domain protein.
    
   0.838
Lgra_2711
Protein IcmO (DotL).
    
 
 0.812
dotD
Lipoprotein DotD.
      
 0.769
dotC
Defect in organelle trafficking lipoprotein DotC.
      
 0.736
Lgra_0646
FeoC like transcriptional regulator.
       0.697
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.697
feoA
Ferrous iron transporter A.
       0.697
dotG
IcmE/DotG protein.
      
 0.643
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.