STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_0664CMP-N-acetylneuraminate monooxygenase. (531 aa)    
Predicted Functional Partners:
xylA
Xylene monooxygenase.
 
  
 0.854
moeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
  
 
 0.795
fadH
2,4-dienoyl-CoA reductase.
    
 0.780
hmp
Oxidoreductase, FAD-binding protein.
  
 
 0.767
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.740
Lgra_2860
Pyruvate phosphate dikinase.
 
 
 0.693
Lgra_2054
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.688
pdhB_2
Pyruvate/2-oxoglutarate dehydrogenase subunit E1.
    
 0.668
Lgra_1951
TQO small subunit DoxD.
 
  
  0.612
kshA
Rieske 2Fe-2S domain protein.
    
 0.594
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.