Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
actP | copA_1 | Lgra_1927 | Lgra_0684 | Copper efflux ATPase. | Cation transport ATPase. | 0.766 |
actP | pacS | Lgra_1927 | Lgra_0863 | Copper efflux ATPase. | Cation transport ATPase. | 0.770 |
blaI | copA_1 | Lgra_3375 | Lgra_0684 | BlaI/MecI/CopY family transcriptional regulator. | Cation transport ATPase. | 0.761 |
blaI | pacS | Lgra_3375 | Lgra_0863 | BlaI/MecI/CopY family transcriptional regulator. | Cation transport ATPase. | 0.761 |
cadA_1 | copA_1 | Lgra_1018 | Lgra_0684 | Zinc, cobalt and lead efflux system. | Cation transport ATPase. | 0.769 |
cadA_1 | pacS | Lgra_1018 | Lgra_0863 | Zinc, cobalt and lead efflux system. | Cation transport ATPase. | 0.771 |
cadA_2 | copA_1 | Lgra_3075 | Lgra_0684 | Zinc, cobalt and lead efflux system. | Cation transport ATPase. | 0.771 |
cadA_2 | pacS | Lgra_3075 | Lgra_0863 | Zinc, cobalt and lead efflux system. | Cation transport ATPase. | 0.771 |
cadA_3 | copA_1 | Lgra_0145 | Lgra_0684 | Cadmium efflux ATPase. | Cation transport ATPase. | 0.769 |
cadA_3 | pacS | Lgra_0145 | Lgra_0863 | Cadmium efflux ATPase. | Cation transport ATPase. | 0.773 |
copA1 | copA_1 | Lgra_3047 | Lgra_0684 | Copper efflux ATPase. | Cation transport ATPase. | 0.764 |
copA1 | pacS | Lgra_3047 | Lgra_0863 | Copper efflux ATPase. | Cation transport ATPase. | 0.766 |
copA_1 | actP | Lgra_0684 | Lgra_1927 | Cation transport ATPase. | Copper efflux ATPase. | 0.766 |
copA_1 | blaI | Lgra_0684 | Lgra_3375 | Cation transport ATPase. | BlaI/MecI/CopY family transcriptional regulator. | 0.761 |
copA_1 | cadA_1 | Lgra_0684 | Lgra_1018 | Cation transport ATPase. | Zinc, cobalt and lead efflux system. | 0.769 |
copA_1 | cadA_2 | Lgra_0684 | Lgra_3075 | Cation transport ATPase. | Zinc, cobalt and lead efflux system. | 0.771 |
copA_1 | cadA_3 | Lgra_0684 | Lgra_0145 | Cation transport ATPase. | Cadmium efflux ATPase. | 0.769 |
copA_1 | copA1 | Lgra_0684 | Lgra_3047 | Cation transport ATPase. | Copper efflux ATPase. | 0.764 |
copA_1 | copA_3 | Lgra_0684 | Lgra_0833 | Cation transport ATPase. | Cation transport ATPase. | 0.773 |
copA_1 | mecI | Lgra_0684 | Lgra_0127 | Cation transport ATPase. | Methicillin resistance regulatory protein mecI. | 0.761 |
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