STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
budB_1Acetolactate synthase; Belongs to the TPP enzyme family. (548 aa)    
Predicted Functional Partners:
gabD
Aldehyde dehydrogenase.
 
 0.953
porB
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
    
 0.930
Lgra_2054
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.892
sfcA_1
Malate dehydrogenase.
  
 0.879
sfcA_2
Malate oxidoreductase.
  
 0.879
maeB
NADP-dependent malic enzyme.
  
 0.879
pykA
Pyruvate kinase II; Belongs to the pyruvate kinase family.
  
 0.867
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.861
aceE
Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.855
psdht
Phenylserine dehydratase.
  
 0.733
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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