Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgra_0782Zinc-dependent metallopeptidase. (604 aa)    
Predicted Functional Partners:
pepO
Metallopeptidase PepO, peptidase, M13 family.
  
   
 0.655
ugpQ
Glycerophosphodiester phosphodiesterase, cytosolic.
       0.553
ugpB
Glycerol-3-phosphate-binding periplasmic protein precursor.
       0.553
ldh
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
     0.539
Lgra_0779
Hypothetical protein.
       0.526
Lgra_2924
Ankyrin repeat-containing protein.
  
     0.422
Lgra_1368
Amino acid racemase.
  
     0.421
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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