Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgra_0843 | Lgra_1551 | Lgra_0843 | Lgra_1551 | Hypothetical protein. | Saframycin Mx1 synthetase B. | 0.647 |
Lgra_0843 | Lgra_2195 | Lgra_0843 | Lgra_2195 | Hypothetical protein. | acyl-CoA synthetase. | 0.654 |
Lgra_0843 | Lgra_2200 | Lgra_0843 | Lgra_2200 | Hypothetical protein. | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | 0.648 |
Lgra_0843 | dctA | Lgra_0843 | Lgra_0842 | Hypothetical protein. | C4-dicarboxylic acid, orotate and citrate transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.486 |
Lgra_0843 | hmp | Lgra_0843 | Lgra_3086 | Hypothetical protein. | Oxidoreductase, FAD-binding protein. | 0.678 |
Lgra_0843 | lgrB_2 | Lgra_0843 | Lgra_1497 | Hypothetical protein. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.546 |
Lgra_0843 | phaB_1 | Lgra_0843 | Lgra_0844 | Hypothetical protein. | Acetyoacetyl CoA reductase. | 0.694 |
Lgra_0843 | ptlI | Lgra_0843 | Lgra_0519 | Hypothetical protein. | Pentalenene oxygenase. | 0.527 |
Lgra_0843 | tycC_1 | Lgra_0843 | Lgra_0545 | Hypothetical protein. | Non-ribosomal peptide synthase. | 0.548 |
Lgra_0843 | xylA | Lgra_0843 | Lgra_0523 | Hypothetical protein. | Xylene monooxygenase. | 0.682 |
Lgra_1551 | Lgra_0843 | Lgra_1551 | Lgra_0843 | Saframycin Mx1 synthetase B. | Hypothetical protein. | 0.647 |
Lgra_1551 | Lgra_2195 | Lgra_1551 | Lgra_2195 | Saframycin Mx1 synthetase B. | acyl-CoA synthetase. | 0.999 |
Lgra_1551 | Lgra_2200 | Lgra_1551 | Lgra_2200 | Saframycin Mx1 synthetase B. | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | 0.846 |
Lgra_1551 | hmp | Lgra_1551 | Lgra_3086 | Saframycin Mx1 synthetase B. | Oxidoreductase, FAD-binding protein. | 0.648 |
Lgra_1551 | lgrB_2 | Lgra_1551 | Lgra_1497 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lgra_1551 | phaB_1 | Lgra_1551 | Lgra_0844 | Saframycin Mx1 synthetase B. | Acetyoacetyl CoA reductase. | 0.751 |
Lgra_1551 | ptlI | Lgra_1551 | Lgra_0519 | Saframycin Mx1 synthetase B. | Pentalenene oxygenase. | 0.999 |
Lgra_1551 | tycC_1 | Lgra_1551 | Lgra_0545 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthase. | 0.999 |
Lgra_1551 | xylA | Lgra_1551 | Lgra_0523 | Saframycin Mx1 synthetase B. | Xylene monooxygenase. | 0.654 |
Lgra_2195 | Lgra_0843 | Lgra_2195 | Lgra_0843 | acyl-CoA synthetase. | Hypothetical protein. | 0.654 |
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