STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lgra_0934Putative Metallophosphoesterase. (359 aa)    
Predicted Functional Partners:
Lgra_2700
Glucan 1,4-alpha-glucosidase.
  
     0.766
Lgra_1025
Aminopeptidase.
  
     0.737
Lgra_1390
Hypothetical protein; Alanine dehydrogenase/PNT, N-terminal domain.
  
     0.714
Lgra_1558
Glycosyltransferase sugar-binding region containing DXD motif protein.
  
     0.667
Lgra_3378
Glutamine amidotransferase.
  
     0.664
mhpA
FAD monooxygenase.
  
     0.617
higA
Antitoxin HigA.
       0.603
egtC
Glutamine amidotransferase.
  
     0.581
Lgra_1597
Glutamine amidotransferase.
  
     0.577
higB_2
mRNA interferase HigB.
       0.565
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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