STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_0977Eukaryotic small stress protein PASS1. (306 aa)    
Predicted Functional Partners:
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
    
   0.840
Lgra_0950
Hypothetical protein.
  
     0.620
besA
Ferri-bacillibactin esterase BesA.
  
     0.617
Lgra_0460
Hypothetical protein.
  
     0.597
Lgra_0092
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.570
Lgra_0128
Putative secreted esterase.
  
     0.570
Lgra_2291
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
     0.539
traI_2
Putative conjugative transfer protein TraI.
  
     0.536
Lgra_3389
Type IV fimbrial biogenesis PilY1-like protein.
  
     0.519
Lgra_0134
Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.516
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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