Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Lgra_1067Lipase. (261 aa)    
Predicted Functional Partners:
Lgra_1066
Coiled-coil protein.
       0.676
Lgra_2160
Protein-tyrosine phosphatase.
  
     0.522
Lgra_1273
Hypothetical protein.
  
     0.506
Lgra_0335
Hypothetical protein.
  
     0.505
dotA
Defect in organelle trafficking protein DotA.
  
     0.479
Lgra_0604
IcmF.
  
     0.444
Lgra_2286
Zinc-iron permease (ZIP) family metal cation transporter.
  
     0.436
ydgA
Putative membrane protein YdgA-like protein.
  
     0.435
Lgra_1249
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.427
lidP
Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
    0.412
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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