Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgra_1137Outer membrane efflux protein. (522 aa)    
Predicted Functional Partners:
acrA_1
Membrane-fusion protein AcrA.
 
  0.985
acrA
RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.949
mdtE
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.942
Lgra_1139
Putative helicase/relaxase.
 
  
  0.941
tolC
Outer membrane protein TolC.
     
 0.933
bepF
Membrane-fusion protein involved in transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.923
macB_2
ABC transporter permease.
 
 
   0.897
bepE_3
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
  0.878
lmxF
Multidrug efflux pump.
    
  0.878
mdtP
Outer membrane efflux lipoprotein.
  
  
  0.876
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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