Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgra_1173 | nfeD | Lgra_1173 | Lgra_1172 | Coiled-coil protein. | Peptidase. | 0.476 |
Lgra_1173 | qmcA | Lgra_1173 | Lgra_1171 | Coiled-coil protein. | Protease. | 0.476 |
Lgra_1342 | nfeD | Lgra_1342 | Lgra_1172 | YbaK/prolyl-tRNA synthetase associated domain-containing protein. | Peptidase. | 0.430 |
hflC | nfeD | Lgra_2790 | Lgra_1172 | Membrane protease subunit HflC; HflC and HflK could regulate a protease. | Peptidase. | 0.429 |
nfeD | Lgra_1173 | Lgra_1172 | Lgra_1173 | Peptidase. | Coiled-coil protein. | 0.476 |
nfeD | Lgra_1342 | Lgra_1172 | Lgra_1342 | Peptidase. | YbaK/prolyl-tRNA synthetase associated domain-containing protein. | 0.430 |
nfeD | hflC | Lgra_1172 | Lgra_2790 | Peptidase. | Membrane protease subunit HflC; HflC and HflK could regulate a protease. | 0.429 |
nfeD | qmcA | Lgra_1172 | Lgra_1171 | Peptidase. | Protease. | 0.966 |
qmcA | Lgra_1173 | Lgra_1171 | Lgra_1173 | Protease. | Coiled-coil protein. | 0.476 |
qmcA | nfeD | Lgra_1171 | Lgra_1172 | Protease. | Peptidase. | 0.966 |