STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_1193Thaumatin domain-containing protein. (889 aa)    
Predicted Functional Partners:
Lgra_2860
Pyruvate phosphate dikinase.
 
     0.748
pglA
Glycoside hydrolase family 28 protein / polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
  
     0.734
Lgra_1644
Ankyrin repeat protein.
  
 
   0.729
Lgra_3010
Hypothetical protein.
  
     0.696
oxdC
Oxalate decarboxylase OxdC.
  
     0.685
Lgra_3022
Exported membrane protein.
  
     0.685
Lgra_3019
TraU protein.
  
     0.674
Lgra_1194
Sporulation related domain protein.
       0.671
Lgra_3017
Membrane protein.
  
     0.667
Lgra_3031
Bile acid beta-glucosidase.
  
     0.660
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.