Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ptpSerine carboxypeptidase. (466 aa)    
Predicted Functional Partners:
Lgra_1543
Protein phosphatase 2C.
  
     0.760
Lgra_2082
Serine carboxypeptidase.
  
     0.748
DWF
7-dehydrocholesterol reductase.
  
     0.740
legL1
Gala protein type 1, 3 or 4.
  
     0.734
Lgra_1494
3-oxo-5-alpha-steroid 4-dehydrogenase.
  
     0.716
Lgra_2381
Calcium-transporting ATPase.
  
    0.715
Lgra_2199
GH3 auxin-responsive promoter.
  
     0.712
Lgra_1148
Acid sphingomyelinase-like phosphodiesterase.
  
     0.696
pieE_2
Substrate of the Dot/Icm secretion system.
  
     0.686
Lgra_1288
Protein kinase.
  
     0.676
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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