STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
helC_1HelC protein. (414 aa)    
Predicted Functional Partners:
helB_1
HelB protein.
 
   0.963
helA_1
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.945
helB_2
HelB protein.
 
   0.844
helA_2
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.780
Lgra_3060
Outer membrane efflux protein.
  
     0.729
cebB
Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.724
cusA_1
Chemiosmotic efflux system B protein A; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.690
cusB
Copper/silver efflux system, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.678
cusA_2
Cation efflux system protein cusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.673
Lgra_1314
Hypothetical protein.
       0.525
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.